Epidemiological and mutational analysis of SARS-CoV-2
RECOVER-COVID19
RicErCa e sviluppO VERsus COVID19 in Campania
Most observed Spike mutations
(remove strain, add variant, add PAM and base change)
Last updated on Apr 04 2021 by Raphael Tze Chuen Lee
963134 sequences were compared to reference sequence EPI_ISL_402124.
| Most_Recent_Accession | WildtypeAA | Position | Mutated AA | #Occurence | Date of collection | % |
|---|---|---|---|---|---|---|
| EPI_ISL_1448024 | D | 614 | G | 927950 | 20210402 | 96.3 |
| EPI_ISL_1448024 | P | 681 | H | 287882 | 20210402 | 29.9 |
| EPI_ISL_1448024 | H | 69 | del | 284194 | 20210402 | 29.5 |
| EPI_ISL_1448024 | V | 70 | del | 280983 | 20210402 | 29.2 |
| EPI_ISL_1448024 | N | 501 | Y | 277643 | 20210402 | 28.8 |
| EPI_ISL_1448024 | T | 716 | I | 271131 | 20210402 | 28.2 |
| EPI_ISL_1448024 | A | 570 | D | 269392 | 20210402 | 28.0 |
| EPI_ISL_1448024 | S | 982 | A | 268234 | 20210402 | 27.9 |
| EPI_ISL_1448024 | D | 1118 | H | 267805 | 20210402 | 27.8 |
| EPI_ISL_1448024 | Y | 144 | del | 265016 | 20210402 | 27.5 |
| EPI_ISL_1424005 | Y | 145 | del | 243514 | 20210331 | 25.3 |
| EPI_ISL_1440770 | A | 222 | V | 137392 | 20210329 | 14.3 |